Improve CLI API parity coverage (#6626)

## Thinking Path

> - Paperclip is a control plane for AI-agent companies, with the CLI
acting as a scriptable operator and agent interface to that control
plane.
> - The REST API surface has grown across companies, agents, issues,
routines, plugins, auth, workspaces, secrets, and operational inspection
commands.
> - The CLI had drifted from that API surface: some commands were
missing, some command shapes differed from docs/reference material, and
several edge cases only failed during end-to-end local-source testing.
> - The local development runbook requires these tests to be disposable
and isolated from a real `~/.paperclip`, `~/.codex`, or `~/.claude`
installation.
> - This pull request adds broad CLI/API parity coverage, fixes the
actionable bugs found during that pass, and records the reproducible
test log under `doc/logs`.
> - The benefit is a more complete, scriptable CLI surface with
regression coverage for the command families exercised by the parity
run.

## What Changed

- Added or expanded CLI command coverage for access/auth, companies,
agents, projects, goals, issues and subresources, routines, plugins,
workspaces, activity/run/cost/dashboard inspection, assets, skills,
secrets, tokens, prompt/wake flows, and local setup helpers.
- Fixed CLI/API parity bugs found during the run, including context
profile patching, issue interaction optional payloads, malformed
tree-hold errors, environment duplicate handling, configure
invalid-section exit codes, worktree pnpm invocation, token agent ID
resolution, plugin tool worker lookup, and routine webhook secret
cleanup.
- Added missing CLI wrappers and route coverage for health/access,
invite resolution URL forwarding, join status normalization, secret
lifecycle commands, LLM docs routes, available-skill isolation, positive
board-claim coverage, and interactive `connect` prompt-flow tests.
- Added a schema-backed `/api/openapi.json` route sufficient for CLI
parity and `paperclipai openapi --json` smoke coverage.
- Added `doc/logs/2026-05-24-cli-api-parity-e2e-log.md` with the
detailed living test/bug log and renamed the log directory from
`doc/bugs` to `doc/logs`.
- Added `doc/plans/2026-05-23-cli-api-parity.md` and the OpenAPI parity
reference used during the pass.

OpenAPI note: this PR intentionally does not try to subsume
`feature/openapi-spec`. The OpenAPI implementation here is schema-backed
and better than the earlier route-inventory stub, but
`feature/openapi-spec` is the fuller/better OpenAPI branch because it
includes exact mounted-route coverage tests and additional current route
coverage. That branch should stay as its own PR and can supersede this
OpenAPI route implementation.

## Verification

Targeted automated checks run:

- `pnpm exec vitest run server/src/__tests__/openapi-routes.test.ts`
- `pnpm exec vitest run server/src/__tests__/board-claim.test.ts`
- `pnpm exec vitest run cli/src/__tests__/connect.test.ts`
- `pnpm exec vitest run cli/src/__tests__/agent-lifecycle.test.ts`
- `pnpm exec vitest run server/src/__tests__/plugin-database.test.ts`
- `pnpm exec vitest run server/src/__tests__/routines-service.test.ts`
- `pnpm --dir cli typecheck`
- `pnpm --dir server typecheck`

Manual/local E2E verification:

- Ran the full disposable local-source CLI/API parity pass with isolated
`PAPERCLIP_HOME`, `PAPERCLIP_CONFIG`, `PAPERCLIP_CONTEXT`,
`PAPERCLIP_AUTH_STORE`, `CODEX_HOME`, and `CLAUDE_HOME` under
`tmp/cli-api-parity`.
- Verified `DATABASE_URL` and `DATABASE_MIGRATION_URL` stayed unset for
the scratch server.
- Verified live health and schema-backed OpenAPI responses on
non-default port `3197`.
- Revoked created board/agent tokens and cleaned up temporary plugins,
secrets, non-default environments, and project workspaces.
- See `doc/logs/2026-05-24-cli-api-parity-e2e-log.md` for the full
command-by-command reproduction log.

Not run:

- Full `pnpm test`, `pnpm test:run`, or `pnpm build` were not run after
the entire branch because the branch is broad and the parity pass used
focused test/typecheck verification plus live isolated CLI reruns.

## Risks

- This is a broad PR and touches many CLI command modules, so review
surface is high. The changes are grouped around one theme, but a split
may be easier if maintainers prefer narrower PRs.
- The OpenAPI route in this PR is not the final/best OpenAPI
implementation. `feature/openapi-spec` has stronger exact-route coverage
and should remain the source for the dedicated OpenAPI PR.
- The living log is intentionally detailed and large. It is useful for
reproducibility but adds documentation weight.
- No UI changes are intended; screenshots are not applicable.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-based coding agent in Codex desktop. Exact served
model/context-window identifier was not exposed in the local app. Work
used shell/Git/GitHub CLI tooling, local source inspection, targeted
test execution, and live isolated Paperclip CLI/API smoke testing.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Devin Foley <devin@devinfoley.com>
This commit is contained in:
Aron Prins 2026-06-03 02:13:29 +02:00 committed by GitHub
parent 68401f82f3
commit 70b1a9109d
No known key found for this signature in database
GPG key ID: B5690EEEBB952194
74 changed files with 18175 additions and 111 deletions

View file

@ -65,6 +65,29 @@ All client commands support:
Company-scoped commands also support `--company-id <id>`.
API base resolution order:
1. `--api-base <url>`
2. `PAPERCLIP_API_URL`
3. selected context profile `apiBase`
4. local Paperclip config server port
5. `http://localhost:3100`
Connection failures include the attempted URL and a `GET /api/health` check hint.
## Connect Wizard
```sh
pnpm paperclipai connect
```
`connect` confirms the resolved API base, verifies `GET /api/health`, authenticates board access when needed, and saves a persona-aware profile:
- `persona=board` for board operator profiles
- `persona=agent` with `agentId` and `agentName` for agent profiles
Profiles store token env-var names, not plaintext tokens. The wizard prints shell exports for the newly created token.
Use `--data-dir` on any CLI command to isolate all default local state (config/context/db/logs/storage/secrets) away from `~/.paperclip`:
```sh
@ -78,6 +101,7 @@ Store local defaults in `~/.paperclip/context.json`:
```sh
pnpm paperclipai context set --api-base http://localhost:3100 --company-id <company-id>
pnpm paperclipai context set --persona agent --agent-id <agent-id> --api-key-env-var-name PAPERCLIP_API_KEY
pnpm paperclipai context show
pnpm paperclipai context list
pnpm paperclipai context use default
@ -95,6 +119,17 @@ export PAPERCLIP_API_KEY=...
```sh
pnpm paperclipai company list
pnpm paperclipai company get <company-id>
pnpm paperclipai company stats
pnpm paperclipai company create --payload-json '{...}'
pnpm paperclipai company update <company-id> --payload-json '{...}'
pnpm paperclipai company branding:update <company-id> --payload-json '{...}'
pnpm paperclipai company archive <company-id>
pnpm paperclipai company export <company-id> --out ./company --include company,agents,projects,issues,skills
pnpm paperclipai company export:preview <company-id> --payload-json '{...}'
pnpm paperclipai company export:api <company-id> --payload-json '{...}'
pnpm paperclipai company import ./company --target new --new-company-name "Imported Company"
pnpm paperclipai company import:preview <company-id> --payload-json '{...}'
pnpm paperclipai company import:apply <company-id> --payload-json '{...}'
pnpm paperclipai company delete <company-id-or-prefix> --yes --confirm <same-id-or-prefix>
```
@ -117,9 +152,102 @@ pnpm paperclipai issue list --company-id <company-id> [--status todo,in_progress
pnpm paperclipai issue get <issue-id-or-identifier>
pnpm paperclipai issue create --company-id <company-id> --title "..." [--description "..."] [--status todo] [--priority high]
pnpm paperclipai issue update <issue-id> [--status in_progress] [--comment "..."]
pnpm paperclipai issue delete <issue-id> --yes
pnpm paperclipai issue comment <issue-id> --body "..." [--reopen]
pnpm paperclipai issue comments <issue-id> [--limit 50]
pnpm paperclipai issue comment:get <issue-id> <comment-id>
pnpm paperclipai issue comment:delete <issue-id> <comment-id>
pnpm paperclipai issue runs <issue-id-or-identifier>
pnpm paperclipai issue live-runs <issue-id-or-identifier>
pnpm paperclipai issue active-run <issue-id-or-identifier>
pnpm paperclipai issue heartbeat-context <issue-id>
pnpm paperclipai issue checkout <issue-id> --agent-id <agent-id> [--expected-statuses todo,backlog,blocked]
pnpm paperclipai issue release <issue-id>
pnpm paperclipai issue force-release <issue-id>
```
Issue subresources are exposed as Paperclip API wrappers. Commands that map to broad server schemas accept JSON payloads and validate them with shared schemas before sending.
```sh
pnpm paperclipai issue child:create <issue-id> --payload-json '{"title":"Child task"}'
pnpm paperclipai issue approvals <issue-id>
pnpm paperclipai issue approval:link <issue-id> <approval-id>
pnpm paperclipai issue approval:unlink <issue-id> <approval-id>
pnpm paperclipai issue read <issue-id>
pnpm paperclipai issue unread <issue-id>
pnpm paperclipai issue archive <issue-id>
pnpm paperclipai issue unarchive <issue-id>
pnpm paperclipai issue recovery-actions <issue-id>
pnpm paperclipai issue recovery:resolve <issue-id> --outcome restored --source-issue-status todo
```
```sh
pnpm paperclipai issue documents <issue-id> [--include-system]
pnpm paperclipai issue document:get <issue-id> <key>
pnpm paperclipai issue document:put <issue-id> <key> --body-file ./plan.md [--title Plan]
pnpm paperclipai issue document:lock <issue-id> <key>
pnpm paperclipai issue document:unlock <issue-id> <key>
pnpm paperclipai issue document:revisions <issue-id> <key>
pnpm paperclipai issue document:restore <issue-id> <key> <revision-id>
pnpm paperclipai issue document:delete <issue-id> <key>
```
```sh
pnpm paperclipai issue work-products <issue-id>
pnpm paperclipai issue work-product:create <issue-id> --payload-json '{"type":"pull_request","provider":"github","title":"PR"}'
pnpm paperclipai issue work-product:update <work-product-id> --payload-json '{"status":"archived"}'
pnpm paperclipai issue work-product:delete <work-product-id>
pnpm paperclipai issue interactions <issue-id>
pnpm paperclipai issue interaction:create <issue-id> --payload-json '{"kind":"request_confirmation","payload":{"version":1,"prompt":"Continue?"}}'
pnpm paperclipai issue interaction:accept <issue-id> <interaction-id> [--selected-client-keys key1,key2]
pnpm paperclipai issue interaction:reject <issue-id> <interaction-id> [--reason "..."]
pnpm paperclipai issue interaction:respond <issue-id> <interaction-id> --answers-json '[{"questionId":"q1","optionIds":["yes"]}]'
pnpm paperclipai issue interaction:cancel <issue-id> <interaction-id> [--reason "..."]
```
```sh
pnpm paperclipai issue tree-state <issue-id>
pnpm paperclipai issue tree-preview <issue-id> --payload-json '{"mode":"pause"}'
pnpm paperclipai issue tree-holds <issue-id> [--status active] [--include-members]
pnpm paperclipai issue tree-hold:create <issue-id> --payload-json '{"mode":"pause","reason":"review"}'
pnpm paperclipai issue tree-hold:get <issue-id> <hold-id>
pnpm paperclipai issue tree-hold:release <issue-id> <hold-id> [--payload-json '{"reason":"done"}']
pnpm paperclipai issue attachments <issue-id>
pnpm paperclipai issue attachment:upload <issue-id> --company-id <company-id> --file ./artifact.txt
pnpm paperclipai issue attachment:download <attachment-id> [--out ./artifact.txt]
pnpm paperclipai issue attachment:delete <attachment-id>
pnpm paperclipai issue label:list --company-id <company-id>
pnpm paperclipai issue label:create --company-id <company-id> --name bug --color '#ff0000'
pnpm paperclipai issue label:delete <label-id>
pnpm paperclipai issue feedback:votes <issue-id>
pnpm paperclipai issue feedback:vote <issue-id> --payload-json '{"targetType":"issue_comment","targetId":"...","vote":"up"}'
```
## Project Commands
```sh
pnpm paperclipai project list --company-id <company-id>
pnpm paperclipai project get <project-id-or-shortname> [--company-id <company-id>]
pnpm paperclipai project create --company-id <company-id> --name "Launch Site" [--goal-ids <id1,id2>] [--lead-agent-id <id>]
pnpm paperclipai project update <project-id-or-shortname> [--status in_progress] [--company-id <company-id>]
pnpm paperclipai project delete <project-id-or-shortname> --yes [--company-id <company-id>]
```
Advanced project fields accept JSON:
```sh
pnpm paperclipai project create --company-id <company-id> --name "Ops" --env-json '{"OPENAI_API_KEY":{"kind":"secret","secretName":"openai-api-key"}}'
pnpm paperclipai project update <project-id> --execution-workspace-policy-json '{"enabled":true,"defaultMode":"shared_workspace"}'
```
## Goal Commands
```sh
pnpm paperclipai goal list --company-id <company-id>
pnpm paperclipai goal get <goal-id>
pnpm paperclipai goal create --company-id <company-id> --title "Grow revenue" [--level company] [--status active]
pnpm paperclipai goal update <goal-id> [--title "..."] [--status achieved]
pnpm paperclipai goal delete <goal-id> --yes
```
## Agent Commands
@ -127,9 +255,44 @@ pnpm paperclipai issue release <issue-id>
```sh
pnpm paperclipai agent list --company-id <company-id>
pnpm paperclipai agent get <agent-id>
pnpm paperclipai agent create --company-id <company-id> --payload-json '{"name":"Builder","adapterType":"codex_local"}'
pnpm paperclipai agent hire --company-id <company-id> --payload-json '{...}'
pnpm paperclipai agent update <agent-id> --payload-json '{"title":"Senior Builder"}'
pnpm paperclipai agent delete <agent-id> --yes
pnpm paperclipai agent me
pnpm paperclipai agent inbox
pnpm paperclipai agent inbox-mine --user-id <board-user-id>
pnpm paperclipai agent wake <agent-id-or-shortname> [--company-id <company-id>] [--reason "..."] [--payload '{"issueId":"..."}']
pnpm paperclipai agent pause <agent-id>
pnpm paperclipai agent resume <agent-id>
pnpm paperclipai agent approve <agent-id>
pnpm paperclipai agent terminate <agent-id>
pnpm paperclipai agent heartbeat:invoke <agent-id>
pnpm paperclipai agent claude-login <agent-id>
pnpm paperclipai agent local-cli <agent-id-or-shortname> --company-id <company-id>
```
Agent configuration and runtime endpoints:
```sh
pnpm paperclipai agent permissions:update <agent-id> --payload-json '{"canCreateAgents":true,"canAssignTasks":true}'
pnpm paperclipai agent configuration <agent-id>
pnpm paperclipai agent config-revisions <agent-id>
pnpm paperclipai agent config-revision:get <agent-id> <revision-id>
pnpm paperclipai agent config-revision:rollback <agent-id> <revision-id>
pnpm paperclipai agent runtime-state <agent-id>
pnpm paperclipai agent runtime-state:reset-session <agent-id> [--task-key <key>]
pnpm paperclipai agent task-sessions <agent-id>
pnpm paperclipai agent skills <agent-id>
pnpm paperclipai agent skills:sync <agent-id> --desired-skills paperclip,github
pnpm paperclipai agent instructions-path:update <agent-id> --payload-json '{"path":"/path/to/AGENTS.md"}'
pnpm paperclipai agent instructions-bundle <agent-id>
pnpm paperclipai agent instructions-bundle:update <agent-id> --payload-json '{"mode":"managed"}'
pnpm paperclipai agent instructions-file:get <agent-id> --path AGENTS.md
pnpm paperclipai agent instructions-file:put <agent-id> --path AGENTS.md --content-file ./AGENTS.md
pnpm paperclipai agent instructions-file:delete <agent-id> --path AGENTS.md
```
`agent local-cli` is the quickest way to run local Claude/Codex manually as a Paperclip agent:
- creates a new long-lived agent API key
@ -143,6 +306,75 @@ pnpm paperclipai agent local-cli codexcoder --company-id <company-id>
pnpm paperclipai agent local-cli claudecoder --company-id <company-id>
```
## Token Commands
Agent API keys are scoped to one company and one agent. Plaintext tokens are printed once at creation.
```sh
pnpm paperclipai token agent create --company-id <company-id> --agent <agent-id-or-name> --name external-worker
pnpm paperclipai token agent list --company-id <company-id> --agent <agent-id-or-name>
pnpm paperclipai token agent revoke --company-id <company-id> --agent <agent-id-or-name> <key-id>
```
Named board API keys use the board authorization model, support revocation and expiration metadata, and are audited server-side.
```sh
pnpm paperclipai token board create --company-id <company-id> --name external-admin
pnpm paperclipai token board create --name short-lived --ttl-days 7
pnpm paperclipai token board list
pnpm paperclipai token board revoke <key-id>
```
## Run Commands
`paperclipai run` without a subcommand still bootstraps and starts a local Paperclip instance. The subcommands below inspect and control API heartbeat runs.
```sh
pnpm paperclipai run list --company-id <company-id> [--agent-id <agent-id>] [--limit 50]
pnpm paperclipai run live --company-id <company-id> [--limit 50] [--min-count 0]
pnpm paperclipai run get <run-id>
pnpm paperclipai run events <run-id> [--after-seq 0] [--limit 200]
pnpm paperclipai run log <run-id> [--offset 0] [--limit-bytes 16384] [--text]
pnpm paperclipai run cancel <run-id>
pnpm paperclipai run issues <run-id>
pnpm paperclipai run workspace-operations <run-id>
pnpm paperclipai run workspace-log <operation-id> [--offset 0] [--limit-bytes 16384] [--text]
pnpm paperclipai run watchdog-decision <run-id> --decision continue [--reason "..."]
```
## Routine Commands
`paperclipai routines disable-all` remains the local maintenance command. The singular `routine` group maps to the REST API.
```sh
pnpm paperclipai routine list --company-id <company-id> [--project-id <project-id>]
pnpm paperclipai routine create --company-id <company-id> --payload-json '{...}'
pnpm paperclipai routine get <routine-id>
pnpm paperclipai routine update <routine-id> --payload-json '{...}'
pnpm paperclipai routine revisions <routine-id>
pnpm paperclipai routine revision:restore <routine-id> <revision-id>
pnpm paperclipai routine runs <routine-id> [--limit 50]
pnpm paperclipai routine run <routine-id> [--payload-json '{...}']
pnpm paperclipai routine trigger:create <routine-id> --payload-json '{...}'
pnpm paperclipai routine trigger:update <trigger-id> --payload-json '{...}'
pnpm paperclipai routine trigger:delete <trigger-id>
pnpm paperclipai routine trigger:rotate-secret <trigger-id>
pnpm paperclipai routine trigger:fire <public-id> [--payload-json '{...}']
```
## Prompt Handoff
Prompt handoff creates Paperclip work. It does not create a chat session.
```sh
pnpm paperclipai agent-prompt <agent-name-or-id> <agent-api-key> "Prompt here"
pnpm paperclipai agent prompt --agent <agent-name-or-id> --api-key-env PAPERCLIP_API_KEY "Prompt here"
pnpm paperclipai agent prompt --profile my-agent "Prompt here"
pnpm paperclipai board prompt --company-id <company-id> --agent <agent-name-or-id> "Prompt here"
```
By default the command creates a `todo` issue assigned to the target agent and wakes the agent. Use `--issue <issue-id>` to add a comment to existing work, and `--no-wake` to skip the wakeup.
## Skills Commands
`paperclipai skills` covers three distinct operations:
@ -269,6 +501,16 @@ pnpm paperclipai secrets declarations --company-id <company-id> [--include agent
pnpm paperclipai secrets create --company-id <company-id> --name anthropic-api-key --value-env ANTHROPIC_API_KEY
pnpm paperclipai secrets link --company-id <company-id> --name prod-stripe-key --provider aws_secrets_manager --external-ref <provider-ref>
pnpm paperclipai secrets doctor --company-id <company-id>
pnpm paperclipai secrets provider-configs --company-id <company-id>
pnpm paperclipai secrets provider-config:create --company-id <company-id> --payload-json '{...}'
pnpm paperclipai secrets provider-config:discovery-preview --company-id <company-id> --payload-json '{...}'
pnpm paperclipai secrets provider-config:get <config-id>
pnpm paperclipai secrets provider-config:update <config-id> --payload-json '{...}'
pnpm paperclipai secrets provider-config:default <config-id>
pnpm paperclipai secrets provider-config:health <config-id>
pnpm paperclipai secrets provider-config:delete <config-id>
pnpm paperclipai secrets remote-import:preview --company-id <company-id> --payload-json '{...}'
pnpm paperclipai secrets remote-import --company-id <company-id> --payload-json '{...}'
pnpm paperclipai secrets migrate-inline-env --company-id <company-id> [--apply]
```
@ -280,10 +522,9 @@ env and the expected AWS SDK runtime credential source; do not store AWS
bootstrap credentials in Paperclip secrets.
Per-company provider vaults (multiple vault instances per provider, default
vault selection, coming-soon GCP/Vault) are configured from the board UI under
`Company Settings → Secrets → Provider vaults` or through
`/api/companies/{companyId}/secret-provider-configs`. There is no CLI surface
for vault management today. See the
vault selection, coming-soon GCP/Vault) can be configured from the board UI under
`Company Settings → Secrets → Provider vaults` or through the provider-config CLI
commands above. See the
[secrets deploy guide](../docs/deploy/secrets.md#provider-vaults) and
[API reference](../docs/api/secrets.md#provider-vaults) for the contract.
@ -304,6 +545,8 @@ pnpm paperclipai approval comment <approval-id> --body "..."
```sh
pnpm paperclipai activity list --company-id <company-id> [--agent-id <agent-id>] [--entity-type issue] [--entity-id <id>]
pnpm paperclipai activity create --company-id <company-id> --payload-json '{...}'
pnpm paperclipai activity issue <issue-id>
```
## Dashboard Commands
@ -312,6 +555,220 @@ pnpm paperclipai activity list --company-id <company-id> [--agent-id <agent-id>]
pnpm paperclipai dashboard get --company-id <company-id>
```
## Org And Agent Config Commands
```sh
pnpm paperclipai whoami
pnpm paperclipai openapi
pnpm paperclipai org get --company-id <company-id>
pnpm paperclipai org svg --company-id <company-id> [--out org.svg]
pnpm paperclipai org png --company-id <company-id> [--out org.png]
pnpm paperclipai agent-config list --company-id <company-id>
```
## Access, Profile, And Instance Commands
```sh
pnpm paperclipai profile session
pnpm paperclipai profile get
pnpm paperclipai profile update --payload-json '{...}'
pnpm paperclipai profile company-user <user-slug> --company-id <company-id>
pnpm paperclipai invite list --company-id <company-id>
pnpm paperclipai invite create --company-id <company-id> --payload-json '{...}'
pnpm paperclipai invite revoke <invite-id>
pnpm paperclipai invite show <token>
pnpm paperclipai invite accept <token> [--payload-json '{...}']
pnpm paperclipai invite onboarding:text <token>
pnpm paperclipai join list --company-id <company-id> [--status pending_approval]
pnpm paperclipai join approve <request-id> --company-id <company-id>
pnpm paperclipai join reject <request-id> --company-id <company-id>
pnpm paperclipai join claim-key <request-id> --claim-secret <secret>
pnpm paperclipai member list --company-id <company-id>
pnpm paperclipai member update <member-id> --company-id <company-id> --payload-json '{...}'
pnpm paperclipai member role-and-grants <member-id> --company-id <company-id> --payload-json '{...}'
pnpm paperclipai member permissions <member-id> --company-id <company-id> --payload-json '{...}'
pnpm paperclipai member archive <member-id> --company-id <company-id> [--payload-json '{...}']
pnpm paperclipai admin user list [--query <text>]
pnpm paperclipai admin user promote <user-id>
pnpm paperclipai admin user demote <user-id>
pnpm paperclipai admin user company-access <user-id>
pnpm paperclipai admin user company-access:update <user-id> --payload-json '{...}'
```
CLI auth challenge endpoints are also exposed for tooling that needs the raw challenge lifecycle:
```sh
pnpm paperclipai auth challenge create --payload-json '{...}'
PAPERCLIP_CHALLENGE_SECRET=<challenge-secret> pnpm paperclipai auth challenge get <challenge-id> --token-env PAPERCLIP_CHALLENGE_SECRET
PAPERCLIP_CHALLENGE_SECRET=<challenge-secret> pnpm paperclipai auth challenge approve <challenge-id> --token-env PAPERCLIP_CHALLENGE_SECRET
PAPERCLIP_CHALLENGE_SECRET=<challenge-secret> pnpm paperclipai auth challenge cancel <challenge-id> --token-env PAPERCLIP_CHALLENGE_SECRET
pnpm paperclipai auth revoke-current
```
`--token <challenge-secret>` is still supported for compatibility, but `--token-env` avoids putting challenge secrets in shell history or process arguments.
```sh
pnpm paperclipai instance scheduler-heartbeats
pnpm paperclipai instance settings:general
pnpm paperclipai instance settings:general:update --payload-json '{...}'
pnpm paperclipai instance settings:experimental
pnpm paperclipai instance settings:experimental:update --payload-json '{...}'
pnpm paperclipai instance database-backup
pnpm paperclipai sidebar preferences
pnpm paperclipai sidebar preferences:update --payload-json '{...}'
pnpm paperclipai sidebar project-preferences --company-id <company-id>
pnpm paperclipai sidebar project-preferences:update --company-id <company-id> --payload-json '{...}'
pnpm paperclipai sidebar badges --company-id <company-id>
pnpm paperclipai inbox dismissals --company-id <company-id>
pnpm paperclipai inbox dismiss --company-id <company-id> --payload-json '{"itemKey":"run:<run-id>"}'
pnpm paperclipai board-claim show <token>
pnpm paperclipai board-claim claim <token> [--payload-json '{...}']
pnpm paperclipai openclaw invite-prompt --company-id <company-id> --payload-json '{...}'
pnpm paperclipai available-skill list
pnpm paperclipai available-skill index
pnpm paperclipai available-skill get <skill-name>
pnpm paperclipai llm agent-configuration
pnpm paperclipai llm agent-configuration:adapter <adapter-type>
pnpm paperclipai llm agent-icons
```
## Adapter, Asset, And Skill Commands
```sh
pnpm paperclipai adapter list
pnpm paperclipai adapter install --payload-json '{"packageName":"@scope/adapter","version":"1.2.3"}'
pnpm paperclipai adapter get <adapter-type>
pnpm paperclipai adapter update <adapter-type> --payload-json '{"disabled":true}'
pnpm paperclipai adapter override <adapter-type> --payload-json '{"paused":true}'
pnpm paperclipai adapter reload <adapter-type>
pnpm paperclipai adapter reinstall <adapter-type>
pnpm paperclipai adapter delete <adapter-type>
pnpm paperclipai adapter config-schema <adapter-type>
pnpm paperclipai adapter ui-parser <adapter-type>
pnpm paperclipai adapter models <adapter-type> --company-id <company-id> [--refresh] [--environment-id <id>]
pnpm paperclipai adapter model-profiles <adapter-type> --company-id <company-id>
pnpm paperclipai adapter detect-model <adapter-type> --company-id <company-id>
pnpm paperclipai adapter test-environment <adapter-type> --company-id <company-id> --payload-json '{...}'
```
```sh
pnpm paperclipai asset image:upload --company-id <company-id> --file ./image.png [--namespace docs] [--alt "..."]
pnpm paperclipai asset logo:upload --company-id <company-id> --file ./logo.svg
pnpm paperclipai asset content <asset-id> --out ./asset.bin
```
```sh
pnpm paperclipai skill list --company-id <company-id>
pnpm paperclipai skill get <skill-id> --company-id <company-id>
pnpm paperclipai skill file <skill-id> --company-id <company-id> [--path SKILL.md]
pnpm paperclipai skill create --company-id <company-id> --payload-json '{...}'
pnpm paperclipai skill file:update <skill-id> --company-id <company-id> --payload-json '{...}'
pnpm paperclipai skill import --company-id <company-id> --payload-json '{"source":"github:owner/repo/path"}'
pnpm paperclipai skill scan-projects --company-id <company-id> --payload-json '{...}'
pnpm paperclipai skill update-status <skill-id> --company-id <company-id>
pnpm paperclipai skill install-update <skill-id> --company-id <company-id>
pnpm paperclipai skill delete <skill-id> --company-id <company-id>
```
## Cost, Finance, And Budget Commands
```sh
pnpm paperclipai cost summary --company-id <company-id>
pnpm paperclipai cost by-agent --company-id <company-id>
pnpm paperclipai cost by-agent-model --company-id <company-id>
pnpm paperclipai cost by-provider --company-id <company-id>
pnpm paperclipai cost by-biller --company-id <company-id>
pnpm paperclipai cost by-project --company-id <company-id>
pnpm paperclipai cost window-spend --company-id <company-id>
pnpm paperclipai cost quota-windows --company-id <company-id>
pnpm paperclipai cost issue <issue-id>
pnpm paperclipai cost event:create --company-id <company-id> --payload-json '{...}'
```
```sh
pnpm paperclipai finance event:create --company-id <company-id> --payload-json '{...}'
pnpm paperclipai finance events --company-id <company-id>
pnpm paperclipai finance summary --company-id <company-id>
pnpm paperclipai finance by-biller --company-id <company-id>
pnpm paperclipai finance by-kind --company-id <company-id>
pnpm paperclipai budget overview --company-id <company-id>
pnpm paperclipai budget policy:upsert --company-id <company-id> --payload-json '{...}'
pnpm paperclipai budget company:update --company-id <company-id> --payload-json '{...}'
pnpm paperclipai budget agent:update <agent-id> --payload-json '{...}'
pnpm paperclipai budget incident:resolve <incident-id> --company-id <company-id> [--payload-json '{...}']
```
## Workspace And Environment Commands
```sh
pnpm paperclipai workspace list --company-id <company-id>
pnpm paperclipai workspace get <execution-workspace-id>
pnpm paperclipai workspace close-readiness <execution-workspace-id>
pnpm paperclipai workspace operations <execution-workspace-id>
pnpm paperclipai workspace update <execution-workspace-id> --payload-json '{...}'
pnpm paperclipai workspace runtime-service <execution-workspace-id> start --payload-json '{...}'
pnpm paperclipai workspace runtime-command <execution-workspace-id> run --payload-json '{...}'
```
```sh
pnpm paperclipai environment list --company-id <company-id>
pnpm paperclipai environment capabilities --company-id <company-id>
pnpm paperclipai environment create --company-id <company-id> --payload-json '{...}'
pnpm paperclipai environment get <environment-id>
pnpm paperclipai environment leases <environment-id>
pnpm paperclipai environment lease <lease-id>
pnpm paperclipai environment update <environment-id> --payload-json '{...}'
pnpm paperclipai environment delete <environment-id>
pnpm paperclipai environment probe <environment-id>
pnpm paperclipai environment probe-config --company-id <company-id> --payload-json '{...}'
```
```sh
pnpm paperclipai project-workspace list <project-id>
pnpm paperclipai project-workspace create <project-id> --payload-json '{...}'
pnpm paperclipai project-workspace update <project-id> <workspace-id> --payload-json '{...}'
pnpm paperclipai project-workspace delete <project-id> <workspace-id>
pnpm paperclipai project-workspace runtime-service <project-id> <workspace-id> restart --payload-json '{...}'
pnpm paperclipai project-workspace runtime-command <project-id> <workspace-id> run --payload-json '{...}'
```
## Plugin Commands
Existing plugin lifecycle commands remain available: `plugin init`, `list`, `install`, `uninstall`, `enable`, `disable`, `inspect`, and `examples`.
```sh
pnpm paperclipai plugin ui-contributions
pnpm paperclipai plugin tools
pnpm paperclipai plugin tool:execute --payload-json '{...}'
pnpm paperclipai plugin health <plugin-id>
pnpm paperclipai plugin logs <plugin-id>
pnpm paperclipai plugin upgrade <plugin-id>
pnpm paperclipai plugin config <plugin-id>
pnpm paperclipai plugin config:set <plugin-id> --payload-json '{"configJson":{...}}'
pnpm paperclipai plugin config:test <plugin-id> --payload-json '{"configJson":{...}}'
pnpm paperclipai plugin jobs <plugin-id>
pnpm paperclipai plugin job:runs <plugin-id> <job-id>
pnpm paperclipai plugin job:trigger <plugin-id> <job-id> [--payload-json '{...}']
pnpm paperclipai plugin webhook <plugin-id> <endpoint-key> [--payload-json '{...}']
pnpm paperclipai plugin dashboard <plugin-id>
pnpm paperclipai plugin bridge:data <plugin-id> --payload-json '{...}'
pnpm paperclipai plugin bridge:action <plugin-id> --payload-json '{...}'
pnpm paperclipai plugin bridge:stream <plugin-id> <channel> [--duration-ms 10000]
pnpm paperclipai plugin data <plugin-id> <key> --payload-json '{...}'
pnpm paperclipai plugin action <plugin-id> <key> --payload-json '{...}'
pnpm paperclipai plugin local-folders <plugin-id> --company-id <company-id>
pnpm paperclipai plugin local-folder:status <plugin-id> <folder-key> --company-id <company-id>
pnpm paperclipai plugin local-folder:validate <plugin-id> <folder-key> --company-id <company-id> [--payload-json '{...}']
pnpm paperclipai plugin local-folder:set <plugin-id> <folder-key> --company-id <company-id> --payload-json '{...}'
```
Feedback traces can be fetched directly by ID when automating export workflows:
```sh
pnpm paperclipai feedback trace <trace-id>
pnpm paperclipai feedback bundle <trace-id>
```
## Heartbeat Command
`heartbeat run` now also supports context/api-key options and uses the shared client stack: