Fix external issue URL rewriting in markdown (#4558)

## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - Issue and comment rendering is part of the board UI where humans
supervise and inspect agent work.
> - External Paperclip issue URLs can appear in comments as references
to other runs, review threads, or remote test environments.
> - Those links must preserve their full destination, including origin,
port, and `#comment-...` fragments, or the operator is taken to the
wrong place.
> - The bug here was that absolute `http(s)` issue URLs were being
normalized into internal `/issues/...` routes in the markdown path.
> - This pull request stops rewriting absolute URLs while keeping
internal issue-reference behavior for relative paths and identifiers.
> - The benefit is that authored external links now navigate exactly
where the operator expects, especially for remote test and
comment-deep-link workflows.

## What Changed

- Stopped `ui/src/lib/issue-reference.ts` from treating absolute
`http(s)` URLs as internal issue paths.
- Added defense-in-depth in `ui/src/lib/mention-chips.ts` so absolute
`http(s)` URLs are never reclassified as issue mention chips.
- Updated `ui/src/lib/issue-reference.test.ts` to cover absolute
Paperclip URLs with preserved origin, port, and comment hash.
- Updated `ui/src/components/MarkdownBody.test.tsx` to assert the
reported URL renders as an external link, not an internal `/issues/...`
href.

## Verification

- `pnpm exec vitest run ui/src/lib/issue-reference.test.ts
ui/src/components/MarkdownBody.test.tsx`
- Expected result: `2` files passed, `37` tests passed.
- Manual spot-check from the issue report path: a URL like
`http://remote.example.test:3103/PAPA/issues/PAPA-115#comment-...`
should remain an external link with its full destination preserved.

## Risks

- Low risk. The change narrows when Paperclip rewrites URLs, so the main
risk is if some existing workflow depended on absolute `http(s)`
Paperclip URLs being converted into internal issue links. The added
regression coverage is aimed at preventing that from regressing
silently.

## Model Used

- OpenAI Codex local agent via Paperclip `codex_local`
- Backing model family: GPT-5-based Codex runtime
- Exact backend model ID/version: not exposed by this adapter/runtime
surface
- Context window: not exposed by this adapter/runtime surface
- Capabilities used: tool use, shell command execution, code editing,
git operations, and local test execution

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots
- [ ] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] I will address all Greptile and reviewer comments before
requesting merge

ui/src/lib/issue-reference.test.ts

@@ -9,8 +9,9 @@ describe("issue-reference", () => {
     expect(parseIssuePathIdFromPath("/issues/:id")).toBeNull();
   });
 
-  it("extracts issue ids from full issue URLs", () => {
-    expect(parseIssuePathIdFromPath("http://localhost:3100/PAP/issues/PAP-1179")).toBe("PAP-1179");
+  it("does not treat full issue URLs as internal issue paths", () => {
+    expect(parseIssuePathIdFromPath("http://localhost:3100/PAP/issues/PAP-1179")).toBeNull();
+    expect(parseIssuePathIdFromPath("http://remote.example.test:3103/PAPA/issues/PAPA-115#comment-850083f3-24de-43e7-a8cd-bc01f7cc9f0d")).toBeNull();
   });
 
   it("does not treat GitHub issue URLs as internal Paperclip issue links", () => {
@@ -24,15 +25,11 @@ describe("issue-reference", () => {
     expect(parseIssueReferenceFromHref("/issues/:id")).toBeNull();
   });
 
-  it("normalizes bare identifiers, issue URLs, and issue scheme links into internal links", () => {
+  it("normalizes bare identifiers, relative issue paths, and issue scheme links into internal links", () => {
     expect(parseIssueReferenceFromHref("pap-1271")).toEqual({
       issuePathId: "PAP-1271",
       href: "/issues/PAP-1271",
     });
-    expect(parseIssueReferenceFromHref("http://localhost:3100/PAP/issues/PAP-1179")).toEqual({
-      issuePathId: "PAP-1179",
-      href: "/issues/PAP-1179",
-    });
     expect(parseIssueReferenceFromHref("/PAP/issues/pap-1180")).toEqual({
       issuePathId: "PAP-1180",
       href: "/issues/PAP-1180",
@@ -54,6 +51,11 @@ describe("issue-reference", () => {
     });
   });
 
+  it("preserves absolute Paperclip issue URLs so origin, port, and hash are not lost", () => {
+    expect(parseIssueReferenceFromHref("http://localhost:3100/PAP/issues/PAP-1179")).toBeNull();
+    expect(parseIssueReferenceFromHref("http://remote.example.test:3103/PAPA/issues/PAPA-115#comment-850083f3-24de-43e7-a8cd-bc01f7cc9f0d")).toBeNull();
+  });
+
   it("ignores literal route placeholder paths", () => {
     expect(parseIssueReferenceFromHref("/issues/:id")).toBeNull();
     expect(parseIssueReferenceFromHref("http://localhost:3100/api/issues/:id")).toBeNull();