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## Thinking Path > - Paperclip orchestrates AI-agent companies through issues, documents, runs, and durable company-scoped state. > - Issue documents are where agents and operators capture plans, handoffs, and work products. > - Before this change, document collaboration could only happen through whole-document edits and detached issue comments. > - Inline document annotations need stable anchors, revision-aware persistence, and UI affordances that do not break existing document editing. > - This pull request adds company-scoped document annotation threads, comments, anchor snapshots, API routes, and board UI. > - The benefit is that operators and agents can discuss specific document passages without losing context as documents evolve. ## What Changed - Added document annotation tables, schema exports, shared types, validators, anchor hashing, and text-anchor helpers. - Added server-side document annotation services and issue routes for listing, creating, commenting, resolving, and reopening annotation threads. - Included annotation summaries in relevant issue document reads and backup/recovery document workspace behavior. - Added React UI for inline document highlights, comment panels, mobile sheet behavior, deep-link focus, and resolved/open filtering. - Added annotation design artifacts, Storybook coverage, screenshots, and a screenshot helper script. - Rebased the branch onto current `paperclipai/paperclip` `master` and renumbered the annotation migration from `0085_old_swarm` to `0091_old_swarm`; the SQL uses `IF NOT EXISTS` guards so environments that previously applied the old migration number can safely apply the new one. - Adjusted the new annotation UI tests to use a local async flush helper because this workspace's React 19.2.4 export does not expose `React.act`. ## Verification - `pnpm run preflight:workspace-links && pnpm exec vitest run packages/shared/src/document-anchors.test.ts server/src/__tests__/document-annotation-routes.test.ts server/src/__tests__/document-annotations-service.test.ts ui/src/components/DocumentAnnotationLayer.test.tsx ui/src/components/IssueDocumentAnnotations.test.tsx ui/src/lib/document-annotation-hash.test.ts ui/src/lib/document-annotation-selection.test.ts` - Confirmed `git diff --check` passes. - Confirmed no `pnpm-lock.yaml` or `.github/workflows/*` files are included in the PR diff. ## Risks - Medium risk: this adds new persisted annotation tables and routes across db/shared/server/ui. - Migration risk is reduced by moving the branch migration to `0091_old_swarm` after upstream `0090_resource_memberships` and keeping the SQL idempotent for old `0085_old_swarm` adopters. - UI risk is mostly around text range anchoring and panel positioning across long documents, folded content, and mobile layouts; the PR includes focused unit coverage and design screenshots. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-using software engineering mode. Context window size is not exposed in this Paperclip runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
189 lines
12 KiB
SQL
189 lines
12 KiB
SQL
CREATE TABLE IF NOT EXISTS "document_annotation_threads" (
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"id" uuid PRIMARY KEY DEFAULT gen_random_uuid() NOT NULL,
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"company_id" uuid NOT NULL,
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"issue_id" uuid NOT NULL,
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"document_id" uuid NOT NULL,
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"document_key" text NOT NULL,
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"status" text DEFAULT 'open' NOT NULL,
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"anchor_state" text DEFAULT 'active' NOT NULL,
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"original_revision_id" uuid,
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"original_revision_number" integer NOT NULL,
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"current_revision_id" uuid,
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"current_revision_number" integer NOT NULL,
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"selected_text" text NOT NULL,
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"prefix_text" text DEFAULT '' NOT NULL,
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"suffix_text" text DEFAULT '' NOT NULL,
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"normalized_start" integer NOT NULL,
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"normalized_end" integer NOT NULL,
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"markdown_start" integer NOT NULL,
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"markdown_end" integer NOT NULL,
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"anchor_confidence" text DEFAULT 'exact' NOT NULL,
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"anchor_selector" jsonb NOT NULL,
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"created_by_agent_id" uuid,
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"created_by_user_id" text,
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"resolved_by_agent_id" uuid,
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"resolved_by_user_id" text,
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"resolved_at" timestamp with time zone,
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"created_at" timestamp with time zone DEFAULT now() NOT NULL,
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"updated_at" timestamp with time zone DEFAULT now() NOT NULL
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);
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--> statement-breakpoint
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CREATE TABLE IF NOT EXISTS "document_annotation_comments" (
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"id" uuid PRIMARY KEY DEFAULT gen_random_uuid() NOT NULL,
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"company_id" uuid NOT NULL,
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"thread_id" uuid NOT NULL,
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"issue_id" uuid NOT NULL,
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"document_id" uuid NOT NULL,
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"body" text NOT NULL,
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"author_type" text NOT NULL,
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"author_agent_id" uuid,
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"author_user_id" text,
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"created_by_run_id" uuid,
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"created_at" timestamp with time zone DEFAULT now() NOT NULL,
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"updated_at" timestamp with time zone DEFAULT now() NOT NULL
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);
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--> statement-breakpoint
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CREATE TABLE IF NOT EXISTS "document_annotation_anchor_snapshots" (
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"id" uuid PRIMARY KEY DEFAULT gen_random_uuid() NOT NULL,
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"company_id" uuid NOT NULL,
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"thread_id" uuid NOT NULL,
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"document_id" uuid NOT NULL,
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"from_revision_id" uuid,
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"from_revision_number" integer,
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"to_revision_id" uuid,
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"to_revision_number" integer NOT NULL,
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"previous_anchor" jsonb NOT NULL,
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"next_anchor" jsonb,
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"anchor_state" text NOT NULL,
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"anchor_confidence" text NOT NULL,
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"failure_reason" text,
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"created_at" timestamp with time zone DEFAULT now() NOT NULL
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);
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_threads_company_id_companies_id_fk') THEN
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ALTER TABLE "document_annotation_threads" ADD CONSTRAINT "document_annotation_threads_company_id_companies_id_fk" FOREIGN KEY ("company_id") REFERENCES "public"."companies"("id") ON DELETE no action ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_threads_issue_id_issues_id_fk') THEN
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ALTER TABLE "document_annotation_threads" ADD CONSTRAINT "document_annotation_threads_issue_id_issues_id_fk" FOREIGN KEY ("issue_id") REFERENCES "public"."issues"("id") ON DELETE cascade ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_threads_document_id_documents_id_fk') THEN
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ALTER TABLE "document_annotation_threads" ADD CONSTRAINT "document_annotation_threads_document_id_documents_id_fk" FOREIGN KEY ("document_id") REFERENCES "public"."documents"("id") ON DELETE cascade ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_threads_original_revision_id_document_revisions_id_fk') THEN
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ALTER TABLE "document_annotation_threads" ADD CONSTRAINT "document_annotation_threads_original_revision_id_document_revisions_id_fk" FOREIGN KEY ("original_revision_id") REFERENCES "public"."document_revisions"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_threads_current_revision_id_document_revisions_id_fk') THEN
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ALTER TABLE "document_annotation_threads" ADD CONSTRAINT "document_annotation_threads_current_revision_id_document_revisions_id_fk" FOREIGN KEY ("current_revision_id") REFERENCES "public"."document_revisions"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_threads_created_by_agent_id_agents_id_fk') THEN
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ALTER TABLE "document_annotation_threads" ADD CONSTRAINT "document_annotation_threads_created_by_agent_id_agents_id_fk" FOREIGN KEY ("created_by_agent_id") REFERENCES "public"."agents"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_threads_resolved_by_agent_id_agents_id_fk') THEN
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ALTER TABLE "document_annotation_threads" ADD CONSTRAINT "document_annotation_threads_resolved_by_agent_id_agents_id_fk" FOREIGN KEY ("resolved_by_agent_id") REFERENCES "public"."agents"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_comments_company_id_companies_id_fk') THEN
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ALTER TABLE "document_annotation_comments" ADD CONSTRAINT "document_annotation_comments_company_id_companies_id_fk" FOREIGN KEY ("company_id") REFERENCES "public"."companies"("id") ON DELETE no action ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_comments_thread_id_document_annotation_threads_id_fk') THEN
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ALTER TABLE "document_annotation_comments" ADD CONSTRAINT "document_annotation_comments_thread_id_document_annotation_threads_id_fk" FOREIGN KEY ("thread_id") REFERENCES "public"."document_annotation_threads"("id") ON DELETE cascade ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_comments_issue_id_issues_id_fk') THEN
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ALTER TABLE "document_annotation_comments" ADD CONSTRAINT "document_annotation_comments_issue_id_issues_id_fk" FOREIGN KEY ("issue_id") REFERENCES "public"."issues"("id") ON DELETE cascade ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_comments_document_id_documents_id_fk') THEN
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ALTER TABLE "document_annotation_comments" ADD CONSTRAINT "document_annotation_comments_document_id_documents_id_fk" FOREIGN KEY ("document_id") REFERENCES "public"."documents"("id") ON DELETE cascade ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_comments_author_agent_id_agents_id_fk') THEN
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ALTER TABLE "document_annotation_comments" ADD CONSTRAINT "document_annotation_comments_author_agent_id_agents_id_fk" FOREIGN KEY ("author_agent_id") REFERENCES "public"."agents"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_comments_created_by_run_id_heartbeat_runs_id_fk') THEN
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ALTER TABLE "document_annotation_comments" ADD CONSTRAINT "document_annotation_comments_created_by_run_id_heartbeat_runs_id_fk" FOREIGN KEY ("created_by_run_id") REFERENCES "public"."heartbeat_runs"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_anchor_snapshots_company_id_companies_id_fk') THEN
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ALTER TABLE "document_annotation_anchor_snapshots" ADD CONSTRAINT "document_annotation_anchor_snapshots_company_id_companies_id_fk" FOREIGN KEY ("company_id") REFERENCES "public"."companies"("id") ON DELETE no action ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_anchor_snapshots_thread_id_document_annotation_threads_id_fk') THEN
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ALTER TABLE "document_annotation_anchor_snapshots" ADD CONSTRAINT "document_annotation_anchor_snapshots_thread_id_document_annotation_threads_id_fk" FOREIGN KEY ("thread_id") REFERENCES "public"."document_annotation_threads"("id") ON DELETE cascade ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_anchor_snapshots_document_id_documents_id_fk') THEN
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ALTER TABLE "document_annotation_anchor_snapshots" ADD CONSTRAINT "document_annotation_anchor_snapshots_document_id_documents_id_fk" FOREIGN KEY ("document_id") REFERENCES "public"."documents"("id") ON DELETE cascade ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_anchor_snapshots_from_revision_id_document_revisions_id_fk') THEN
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ALTER TABLE "document_annotation_anchor_snapshots" ADD CONSTRAINT "document_annotation_anchor_snapshots_from_revision_id_document_revisions_id_fk" FOREIGN KEY ("from_revision_id") REFERENCES "public"."document_revisions"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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DO $$ BEGIN
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IF NOT EXISTS (SELECT 1 FROM pg_constraint WHERE conname = 'document_annotation_anchor_snapshots_to_revision_id_document_revisions_id_fk') THEN
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ALTER TABLE "document_annotation_anchor_snapshots" ADD CONSTRAINT "document_annotation_anchor_snapshots_to_revision_id_document_revisions_id_fk" FOREIGN KEY ("to_revision_id") REFERENCES "public"."document_revisions"("id") ON DELETE set null ON UPDATE no action;
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END IF;
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END $$;
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_threads_company_document_status_idx" ON "document_annotation_threads" USING btree ("company_id","document_id","status");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_threads_company_issue_status_idx" ON "document_annotation_threads" USING btree ("company_id","issue_id","status");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_threads_company_current_revision_open_idx" ON "document_annotation_threads" USING btree ("company_id","document_id","current_revision_id","status");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_threads_company_anchor_state_idx" ON "document_annotation_threads" USING btree ("company_id","anchor_state");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_comments_company_thread_created_at_idx" ON "document_annotation_comments" USING btree ("company_id","thread_id","created_at");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_comments_company_issue_created_at_idx" ON "document_annotation_comments" USING btree ("company_id","issue_id","created_at");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_comments_company_document_created_at_idx" ON "document_annotation_comments" USING btree ("company_id","document_id","created_at");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_comments_body_search_idx" ON "document_annotation_comments" USING gin ("body" gin_trgm_ops);
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_anchor_snapshots_company_thread_created_at_idx" ON "document_annotation_anchor_snapshots" USING btree ("company_id","thread_id","created_at");
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--> statement-breakpoint
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CREATE INDEX IF NOT EXISTS "document_annotation_anchor_snapshots_company_document_revision_idx" ON "document_annotation_anchor_snapshots" USING btree ("company_id","document_id","to_revision_number");
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